STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN54596.1GCN5-related N-acetyltransferase. (181 aa)    
Predicted Functional Partners:
GAN54595.1
Hypothetical protein.
       0.773
GAN54594.1
Lipopolysaccharide biosynthesis protein.
       0.741
GAN55192.1
aromatic-L-amino-acid decarboxylase.
 
  
   0.631
GAN54593.1
Hypothetical protein.
       0.611
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.608
GAN53116.1
TonB-dependent receptor.
  
     0.584
GAN55648.1
Outer membrane heme receptor.
  
     0.512
GAN54597.1
Hypothetical protein.
       0.503
GAN54598.1
Hypothetical protein.
       0.503
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 0.499
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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