STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN54718.1Cupin 2 barrel domain-containing protein. (158 aa)    
Predicted Functional Partners:
GAN55114.1
tonB-dependent receptor.
  
     0.588
GAN53927.1
Carbohydrate-selective porin OprB.
  
     0.572
GAN53780.1
Hypothetical protein.
  
     0.554
GAN53086.1
TonB-dependent receptor plug.
  
     0.533
GAN54719.1
Phytoene synthase.
       0.527
GAN54720.1
Oxidoreductase.
       0.499
GAN55412.1
Hypothetical protein.
  
     0.489
GAN54788.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.487
GAN53753.1
Hypothetical protein.
  
     0.484
GAN54826.1
Cobalt/zinc/cadmium resistance heavy metal efflux pump protein CzcC.
  
     0.481
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.