STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN54808.1Glycosyl transferase family 2. (323 aa)    
Predicted Functional Partners:
GAN54809.1
ABC transporter ATP-binding protein.
       0.762
GAN54810.1
ABC transporter permease protein.
       0.762
GAN53868.1
Membrane protein.
 
     0.621
GAN53870.1
Hypothetical protein.
 
     0.605
clpP-2
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
      0.574
GAN54242.1
Hypothetical protein.
 
 
  0.566
GAN54811.1
Hypothetical protein.
       0.564
GAN55101.1
Dolichol-phosphate mannosyltransferase.
 
  
  0.488
GAN54048.1
Glycosyl transferase family protein.
  
  
  0.436
GAN54849.1
Metallophosphoesterase.
  
     0.431
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.