STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN54878.1Oxidoreductase, NAD-binding Rossmann fold family protein. (314 aa)    
Predicted Functional Partners:
GAN54444.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
  0.860
GAN55338.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
  0.857
GAN53947.1
Aldose 1-epimerase.
   
 
  0.854
GAN54877.1
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
     0.830
GAN54876.1
ABC transporter-like protein.
 
    0.674
GAN54875.1
Periplasmic protein/LacI transcriptional regulator.
 
     0.663
GAN54306.1
3-beta-hydroxy-delta(5)-steroid dehydrogenase.
   
 
  0.552
GAN55714.1
Transcriptional regulator.
   
 
  0.552
GAN54425.1
D-erythrulose 4-phosphate dehydrogenase.
  
 
  0.535
GAN55504.1
Myo-inositol catabolism protein.
  
 
  0.530
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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