STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN55162.1Oxidoreductase. (199 aa)    
Predicted Functional Partners:
GAN54713.1
Na+/H+ antiporter.
  
 
 0.480
GAN55163.1
Hypothetical protein.
       0.452
GAN52692.1
Hypothetical protein.
   
    0.444
GAN53975.1
Class I and II aminotransferase.
   
    0.444
GAN54094.1
Aspartate aminotransferase.
   
    0.444
GAN54095.1
Aspartate aminotransferase A.
   
    0.444
GAN54390.1
Aspartate aminotransferase A.
   
    0.444
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.