STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN55346.1TonB-dependent receptor. (719 aa)    
Predicted Functional Partners:
GAN55345.1
Hypothetical protein.
       0.773
GAN54046.1
Outer membrane siderophore receptor.
  
 
  0.746
GAN55201.1
TonB-dependent receptor protein.
  
 
  0.740
GAN53944.1
TonB-dependent receptor.
  
 
  0.733
GAN53810.1
TonB-dependent receptor.
  
 
  0.730
GAN53780.1
Hypothetical protein.
  
     0.717
GAN53708.1
Outer membrane siderophore receptor.
  
 
  0.708
GAN55155.1
Hypothetical protein.
  
     0.708
GAN52824.1
TonB periplasmic protein.
  
   0.681
GAN54398.1
TonB-dependent receptor.
  
 
  0.662
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.