Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAT18468.1 | BAT18469.1 | Asbog_00152 | Asbog_00153 | Nitrogen fixing thioredoxin-like protein NifU. | NADH dehydrogenase/NAD(P)H nitroreductase. | 0.819 |
| BAT18468.1 | BAT18470.1 | Asbog_00152 | Asbog_00154 | Nitrogen fixing thioredoxin-like protein NifU. | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.809 |
| BAT18468.1 | BAT18471.1 | Asbog_00152 | Asbog_00155 | Nitrogen fixing thioredoxin-like protein NifU. | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.809 |
| BAT18468.1 | BAT19150.1 | Asbog_00152 | Asbog_00856 | Nitrogen fixing thioredoxin-like protein NifU. | Iron-sulfur, Fe-S, cluster assembly protein; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Belongs to the HesB/IscA family. | 0.632 |
| BAT18468.1 | BAT19378.1 | Asbog_00152 | Asbog_01096 | Nitrogen fixing thioredoxin-like protein NifU. | FeS assembly accessory protein; Belongs to the HesB/IscA family. | 0.710 |
| BAT18468.1 | BAT20312.1 | Asbog_00152 | Asbog_02056 | Nitrogen fixing thioredoxin-like protein NifU. | Cysteine desulfurase NifS/aminotransferase class V. | 0.662 |
| BAT18468.1 | BAT20313.1 | Asbog_00152 | Asbog_02057 | Nitrogen fixing thioredoxin-like protein NifU. | Cysteine desulfurase NifS/aminotransferase class V. | 0.680 |
| BAT18468.1 | BAT20628.1 | Asbog_00152 | Asbog_02373 | Nitrogen fixing thioredoxin-like protein NifU. | Pyruvate ferredoxin/flavodoxin oxidoreductase; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e. | 0.845 |
| BAT18468.1 | hemC | Asbog_00152 | Asbog_00133 | Nitrogen fixing thioredoxin-like protein NifU. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.803 |
| BAT18468.1 | sdhB | Asbog_00152 | Asbog_00368 | Nitrogen fixing thioredoxin-like protein NifU. | Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.775 |
| BAT18469.1 | BAT18468.1 | Asbog_00153 | Asbog_00152 | NADH dehydrogenase/NAD(P)H nitroreductase. | Nitrogen fixing thioredoxin-like protein NifU. | 0.819 |
| BAT18469.1 | BAT18470.1 | Asbog_00153 | Asbog_00154 | NADH dehydrogenase/NAD(P)H nitroreductase. | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.822 |
| BAT18469.1 | BAT18471.1 | Asbog_00153 | Asbog_00155 | NADH dehydrogenase/NAD(P)H nitroreductase. | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.819 |
| BAT18470.1 | BAT18468.1 | Asbog_00154 | Asbog_00152 | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Nitrogen fixing thioredoxin-like protein NifU. | 0.809 |
| BAT18470.1 | BAT18469.1 | Asbog_00154 | Asbog_00153 | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | NADH dehydrogenase/NAD(P)H nitroreductase. | 0.822 |
| BAT18470.1 | BAT18471.1 | Asbog_00154 | Asbog_00155 | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.881 |
| BAT18471.1 | BAT18468.1 | Asbog_00155 | Asbog_00152 | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Nitrogen fixing thioredoxin-like protein NifU. | 0.809 |
| BAT18471.1 | BAT18469.1 | Asbog_00155 | Asbog_00153 | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | NADH dehydrogenase/NAD(P)H nitroreductase. | 0.819 |
| BAT18471.1 | BAT18470.1 | Asbog_00155 | Asbog_00154 | Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.881 |
| BAT19150.1 | BAT18468.1 | Asbog_00856 | Asbog_00152 | Iron-sulfur, Fe-S, cluster assembly protein; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Belongs to the HesB/IscA family. | Nitrogen fixing thioredoxin-like protein NifU. | 0.632 |
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