STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18470.1Peptidase; Different start site was predicted by ab initio prediction:glimmer3:3.02. (220 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.960
BAT18511.1
ATP/GTP hydrolase.
  
 
 0.958
BAT18471.1
Ribosomal protein alanine acetyltransferase; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
 
 0.881
BAT18469.1
NADH dehydrogenase/NAD(P)H nitroreductase.
  
    0.822
BAT18468.1
Nitrogen fixing thioredoxin-like protein NifU.
       0.809
BAT18466.1
Two component transcriptional regulator; Different start site was predicted by ab initio prediction:glimmer3:3.02.
       0.561
BAT18467.1
Two component sensor histidine kinase EnvZ.
       0.561
guaA
GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP.
     
 0.513
BAT18528.1
Bacteriophage-type DNA polymerase; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
    0.459
birA
biotin--acetyl-CoA-carboxylase ligase.
   
    0.455
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.