STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18545.1Alcohol dehydrogenase short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
BAT18599.1
Oxidoreductase/short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.752
BAT20303.1
oxidoreductase/SDR, dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.752
BAT19976.1
Oxidoreductase/short-chain dehydrogenase/reductase SDR.
  
 
   0.741
BAT19569.1
oxidoreductase/SDR, D-arabitol dehydrogenase.
  
 
   0.701
BAT18630.1
Oxidoreductase/short-chain dehydrogenase/reductase SDR.
  
 
   0.683
BAT20038.1
Short-chain dehydrogenase/reductase SDR; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.682
BAT19616.1
Oxidoreductase/short-chain dehydrogenase/reductase SDR.
  
 
   0.681
BAT19910.1
oxidoreductase/SDR, NAD(P)-dependent glucose 1-dehydrogenase.
  
 
   0.664
BAT18609.1
oxidoreductase/SDR, 3(or 17)-beta-hydroxysteroid dehydrogenase.
  
 
   0.616
BAT20407.1
Polyketide synthase.
  
 
 0.597
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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