STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18547.1Glycosyl/hexosyl transferase. (360 aa)    
Predicted Functional Partners:
BAT18548.1
Phosphohydrolase.
  
    0.776
BAT18546.1
Hypothetical protein.
       0.559
BAT20407.1
Polyketide synthase.
   
 
 0.493
BAT19962.1
Glycosyl transferase.
 
     0.473
BAT19232.1
Glycosyl transferase group 1.
  
     0.451
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.440
BAT18440.1
Hypothetical protein.
  
     0.438
BAT18696.1
UDP-glucose 6-dehydrogenase.
 
  
 0.431
BAT20321.1
Glycosyl transferase.
  
     0.427
BAT18584.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Different start site was predicted by ab initio prediction:glimmer3:3.02; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.421
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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