STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18574.1Two component sensor histidine kinase NtrY. (816 aa)    
Predicted Functional Partners:
BAT18575.1
Two component transcriptional regulator sigma54 specific Fis/NtrC/NtrX.
 0.998
BAT18573.1
Transcriptional regulator Fis; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02.
 
 
 0.860
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.739
BAT19192.1
Two component hybrid sensor histidine kinase and transcriptional regulator; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
 
 
 0.732
BAT18938.1
Two component hybrid sensor histidine kinase and transcriptional regulator.
  
 
 0.692
BAT20402.1
Two component hybrid sensor histidine kinase and transcriptional regulator.
 
 
 
 0.674
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.622
BAT19191.1
Two component sensor histidine kinase.
 
 
 
0.606
BAT19007.1
Glutathione S-transferase.
  
   
 0.605
hfq
RNA-binding chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
     
 0.585
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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