STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18642.1D-isomer specific 2-hydroxyacid dehydrogenase. (316 aa)    
Predicted Functional Partners:
BAT20806.1
2-hydroxyacid dehydrogenase; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
  
 
0.923
BAT18653.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
    
  0.903
eda
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02.
    
  0.902
pgp
Phosphoglycolate phosphatase.
    
 0.902
BAT19728.1
Phosphoglycolate phosphatase.
    
 0.902
BAT20139.1
Lactoylglutathione lyase/glyoxalase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
     
  0.900
BAT20965.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
  0.900
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.840
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
   
 
  0.840
BAT20277.1
Threonine dehydratase.
  
 
 0.839
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.