STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18687.1ABC transporter. (262 aa)    
Predicted Functional Partners:
BAT18688.1
ABC transporter.
 0.999
BAT20432.1
ABC transporter; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
 
 0.996
BAT21043.1
ABC transporter toluene tolerance protein.
 
 0.987
BAT19619.1
ABC transporter toluene tolerance protein.
 
 0.960
BAT19206.1
ABC transporter; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
 0.959
BAT20433.1
ABC transporter.
  
  
 
0.914
BAT19208.1
ABC transporter.
  
 0.909
BAT18998.1
ABC transporter oligopeptide permease OppD; Different start site was predicted by ab initio prediction:glimmer3:3.02; Belongs to the ABC transporter superfamily.
 
    
0.905
BAT18932.1
ABC transporter toluene transporter auxiliary component.
 
 
 0.900
BAT19207.1
ABC transporter.
     
  0.900
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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