Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAT18681.1 | ctaB | Asbog_00371 | Asbog_01818 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.413 |
| BAT18681.1 | ctaD | Asbog_00371 | Asbog_01819 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome c oxidase subunit 1; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e. | 0.412 |
| BAT18681.1 | cyoA-1 | Asbog_00371 | Asbog_01765 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit II; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.797 |
| BAT18681.1 | cyoA-2 | Asbog_00371 | Asbog_00581 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit II; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19. | 0.611 |
| BAT18681.1 | cyoB-1 | Asbog_00371 | Asbog_01764 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.693 |
| BAT18681.1 | cyoB-2 | Asbog_00371 | Asbog_00580 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit I; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e; Belongs to the heme-copper respiratory oxidase family. | 0.412 |
| BAT18681.1 | cyoC-1 | Asbog_00371 | Asbog_01763 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit III. | 0.675 |
| BAT18681.1 | cyoC-2 | Asbog_00371 | Asbog_00579 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit III. | 0.675 |
| BAT18681.1 | cyoD-1 | Asbog_00371 | Asbog_01762 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit IV. | 0.607 |
| BAT18681.1 | cyoD-2 | Asbog_00371 | Asbog_00578 | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Cytochrome o ubiquinol oxidase subunit IV. | 0.607 |
| ctaB | BAT18681.1 | Asbog_01818 | Asbog_00371 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Succinate dehydrogenase cytochrome b subunit; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.413 |
| ctaB | ctaD | Asbog_01818 | Asbog_01819 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase subunit 1; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e. | 0.993 |
| ctaB | cyoA-1 | Asbog_01818 | Asbog_01765 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit II; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.977 |
| ctaB | cyoA-2 | Asbog_01818 | Asbog_00581 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit II; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19. | 0.973 |
| ctaB | cyoB-1 | Asbog_01818 | Asbog_01764 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.995 |
| ctaB | cyoB-2 | Asbog_01818 | Asbog_00580 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit I; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e; Belongs to the heme-copper respiratory oxidase family. | 0.994 |
| ctaB | cyoC-1 | Asbog_01818 | Asbog_01763 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit III. | 0.989 |
| ctaB | cyoC-2 | Asbog_01818 | Asbog_00579 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit III. | 0.986 |
| ctaB | cyoD-1 | Asbog_01818 | Asbog_01762 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit IV. | 0.976 |
| ctaB | cyoD-2 | Asbog_01818 | Asbog_00578 | Protoheme IX farnesyltransferase, heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome o ubiquinol oxidase subunit IV. | 0.976 |
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