STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18933.1Lipoprotein. (281 aa)    
Predicted Functional Partners:
BAT18932.1
ABC transporter toluene transporter auxiliary component.
 
 
 
 0.954
BAT21043.1
ABC transporter toluene tolerance protein.
 
   
 0.831
BAT19619.1
ABC transporter toluene tolerance protein.
 
   
 0.785
BAT19758.1
Hypothetical protein.
    
 
 0.735
BAT20635.1
Hypothetical protein.
    
 
 0.735
BAT20432.1
ABC transporter; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
 
   
 0.675
BAT18688.1
ABC transporter.
 
   
 0.621
BAT18687.1
ABC transporter.
 
   
 0.576
hpnM
Hopanoid biosynthesis associated membrane protein HpnM.
 
 
 
 0.551
BAT18992.1
Unknown function DUF3576 domain protein; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.526
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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