STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT18989.1Sodium:dicarboxylate symporter/C4-dicarboxylate transporter; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (415 aa)    
Predicted Functional Partners:
BAT20402.1
Two component hybrid sensor histidine kinase and transcriptional regulator.
     
 0.542
BAT18990.1
Hypothetical protein; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
       0.504
BAT18680.1
Succinate dehydrogenase membrane anchor subunit.
   
    0.459
BAT20113.1
Glutamate synthase.
     
 0.457
BAT18938.1
Two component hybrid sensor histidine kinase and transcriptional regulator.
     
 0.448
BAT18639.1
ABC transporter amino acid permease.
  
  
 0.414
BAT20344.1
ABC transporter amino acid permease; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
  
 0.414
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.