STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19106.1Polysaccharide biosynthesis protein domain protein. (442 aa)    
Predicted Functional Partners:
BAT19105.1
Glycosyl transferase group 1.
  
    0.793
BAT19489.1
Hypothetical protein.
 
  
 0.784
BAT18326.1
dTDP-glucose 4,6-dehydratase; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
  
 0.780
BAT18696.1
UDP-glucose 6-dehydrogenase.
  
  
 0.780
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.779
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.778
BAT19243.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase domain protein.
 
  
 0.776
BAT19239.1
Hypothetical protein.
 
     0.747
BAT19554.1
TonB-dependent receptor.
  
     0.726
BAT19232.1
Glycosyl transferase group 1.
  
    0.720
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.