STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19148.1Unknown function DUF1849 domain protein. (279 aa)    
Predicted Functional Partners:
BAT20874.1
Tetratricopeptide repeat domain protein.
  
     0.713
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.662
BAT19981.1
Unknown function DUF4175 domain protein.
  
     0.656
BAT18767.1
Unknown function DUF721 domain protein; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
     0.629
tatA
Sec-independent protein translocase protein TatA/E-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
     0.590
BAT20979.1
Transcriptional regulator TetR; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.580
BAT19503.1
Cell division inhibitor/septum formation inhibitor.
  
     0.579
BAT19067.1
Unknown function DUF58 domain protein.
  
     0.577
BAT19187.1
DUF218 domain protein; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.556
BAT20830.1
Proton channel/TonB-dependent biopolymer transporter MotA/TolQ/ExbB.
  
     0.550
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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