STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19294.1Fusaric acid resistance protein FusB. (683 aa)    
Predicted Functional Partners:
BAT19292.1
ABC transporter/major facilitator superfamily multidrug resistance transporter HlyD/EmrA/FusE protein.
  
 0.922
BAT20505.1
ABC transporter/major facilitator superfamily multidrug resistance transporter HlyD/EmrA/FusE protein.
  
 0.764
BAT18925.1
Porin B carbohydrate-selective OprB; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
     0.741
BAT18866.1
Porin B carbohydrate-selective OprB; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
  
     0.712
BAT20999.1
Fusaric acid resistance protein-like domain protein.
  
     0.700
BAT19293.1
Unknown function DUF1656 domain protein.
       0.697
BAT20418.1
Porin B carbohydrate-selective OprB.
  
     0.693
BAT21007.1
TPR repeat domain protein; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
  
     0.655
BAT18777.1
Porin B carbohydrate-selective OprB.
  
     0.649
BAT20435.1
Outer membrane lipoprotein.
  
     0.634
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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