STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19609.1Transcriptional regulator LacI. (340 aa)    
Predicted Functional Partners:
BAT20113.1
Glutamate synthase.
    
 
 0.854
BAT18795.1
Phosphotransferase system phosphocarrier protein HPr.
   
 
 0.749
tal
Bifunctional transaldolase/phosoglucose isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.576
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.472
BAT18986.1
Transcriptional regulator GntR.
  
   
 0.467
BAT19610.1
Alpha-ketoglutarate/sugar transporter.
     
 0.465
BAT18938.1
Two component hybrid sensor histidine kinase and transcriptional regulator.
    
 
 0.460
BAT18665.1
Transcriptional regulator LacI; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
 
  
 0.455
BAT20372.1
Glucose/galactose transporter.
 
   
 0.453
BAT18787.1
Fructokinase; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
 
  
 0.444
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.