STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19887.1Na+/H+ antiporter. (402 aa)    
Predicted Functional Partners:
BAT19774.1
Potassium/proton antiporter, sodium/hydrogen exchanger; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.590
BAT19272.1
Unknown function DUF423 domain protein; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e.
 
     0.567
BAT19742.1
Heavy metal transporter ATPase.
  
  
 0.567
BAT19886.1
Zn-dependent protease.
  
  
 0.564
BAT20895.1
TonB-dependent receptor.
  
     0.553
BAT20374.1
Porin B carbohydrate-selective OprB; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.510
BAT20711.1
TonB-dependent receptor; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
  
     0.493
BAT19596.1
Antiporter of Na+/H+.
   
 
 0.477
BAT20372.1
Glucose/galactose transporter.
  
     0.473
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.472
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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