STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT19907.1Aldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (373 aa)    
Predicted Functional Partners:
BAT19906.1
S-formylglutathione hydrolase/esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
BAT19735.1
Alcohol dehydrogenase iron-containing.
   
 0.973
BAT19633.1
Alcohol dehydrogenase.
    
0.953
BAT20364.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.916
BAT20647.1
Metal-sensitive transcriptional repressor domain protein.
  
  
 0.784
BAT19905.1
Different start site was predicted by ab initio prediction:GeneMarkS:4.6e; Belongs to the RNase T2 family.
       0.773
BAT20838.1
Alcohol dehydrogenase iron-containing; Different start site was predicted by ab initio prediction:glimmer3:3.02.
   
 
 0.750
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.738
tal
Bifunctional transaldolase/phosoglucose isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.552
BAT19908.1
Bestrophin, RFP-TM, chloride channel domain protein.
       0.533
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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