Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAT18319.1 | BAT20012.1 | Asbog_00001 | Asbog_01750 | Unknown function DUF20 domain protein. | Transporter. | 0.586 |
BAT18918.1 | BAT20012.1 | Asbog_00620 | Asbog_01750 | ABC transporter. | Transporter. | 0.427 |
BAT19436.1 | BAT20012.1 | Asbog_01158 | Asbog_01750 | Uncharacterized protein conserved in bacteria DUF2147 domain protein; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e. | Transporter. | 0.404 |
BAT20011.1 | BAT20012.1 | Asbog_01749 | Asbog_01750 | ABC transporter. | Transporter. | 0.625 |
BAT20011.1 | ndk | Asbog_01749 | Asbog_01748 | ABC transporter. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.630 |
BAT20012.1 | BAT18319.1 | Asbog_01750 | Asbog_00001 | Transporter. | Unknown function DUF20 domain protein. | 0.586 |
BAT20012.1 | BAT18918.1 | Asbog_01750 | Asbog_00620 | Transporter. | ABC transporter. | 0.427 |
BAT20012.1 | BAT19436.1 | Asbog_01750 | Asbog_01158 | Transporter. | Uncharacterized protein conserved in bacteria DUF2147 domain protein; Different start site was predicted by ab initio prediction:GeneMarkS:4.6e. | 0.404 |
BAT20012.1 | BAT20011.1 | Asbog_01750 | Asbog_01749 | Transporter. | ABC transporter. | 0.625 |
BAT20012.1 | BAT20013.1 | Asbog_01750 | Asbog_01751 | Transporter. | Transcriptional regulator MerR; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02. | 0.441 |
BAT20012.1 | ftsI | Asbog_01750 | Asbog_01027 | Transporter. | Cell division transpeptidase FtsI. | 0.486 |
BAT20012.1 | ndk | Asbog_01750 | Asbog_01748 | Transporter. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.489 |
BAT20013.1 | BAT20012.1 | Asbog_01751 | Asbog_01750 | Transcriptional regulator MerR; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02. | Transporter. | 0.441 |
ftsI | BAT20012.1 | Asbog_01027 | Asbog_01750 | Cell division transpeptidase FtsI. | Transporter. | 0.486 |
ndk | BAT20011.1 | Asbog_01748 | Asbog_01749 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | ABC transporter. | 0.630 |
ndk | BAT20012.1 | Asbog_01748 | Asbog_01750 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Transporter. | 0.489 |