STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT20387.1Purine nucleoside permease. (380 aa)    
Predicted Functional Partners:
BAT20386.1
Adenosine deaminase.
 
     0.935
BAT20558.1
Hypothetical protein; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Different start site was predicted by ab initio prediction:glimmer3:3.02.
  
     0.661
BAT18865.1
TonB-dependent outer membrane siderophore receptor.
  
     0.535
BAT19747.1
Porin B carbohydrate-selective OprB.
  
     0.465
BAT19270.1
Protein disulfide isomerase.
  
     0.461
xdhA
Xanthine dehydrogenase XdhA.
 
     0.461
BAT20434.1
Paraquat-inducible protein B.
  
     0.461
xdhB
Xanthine dehydrogenase molybdopterin binding subunit XdhB; Different start site was predicted by ab initio prediction:glimmer3:3.02.
 
     0.441
BAT19775.1
TonB-dependent receptor; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19.
  
     0.415
BAT19213.1
Ferrichrome siderophore receptor FcuA.
  
     0.412
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.