STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAT20803.1RND superfamily multidrug efflux pump acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1054 aa)    
Predicted Functional Partners:
BAT20804.1
Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.979
BAT19015.1
Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.901
BAT20805.1
Secretion system type I outer membrane efflux pump lipoprotein NodT.
   0.879
BAT18321.1
Heavy metal/cation efflux pump CzcB/HlyD protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.769
BAT19059.1
Multidrug resistance efflux pump acriflavin resistance protein HlyD/AcrB/AcrD/AcrF; Different start site was predicted by ab initio prediction:MetaGeneAnnotator:2008/8/19; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.742
BAT19635.1
Heavy metal/cation efflux pump CzcB/HlyD protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.642
BAT20646.1
Heavy metal/cation efflux pump CzcB/HlyD protein; Different start site was predicted by ab initio prediction:glimmer3:3.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.570
BAT19016.1
Secretion system type I outer membrane efflux pump lipoprotein NodT; Different start site was predicted by ab initio prediction:glimmer3:3.02.
 
   0.453
BAT18733.1
Outer membrane protein family DUF1597 domain protein.
  
     0.437
Your Current Organism:
Asaia bogorensis
NCBI taxonomy Id: 1231624
Other names: A. bogorensis NBRC 16594, Asaia bogorensis 71, Asaia bogorensis JCM 10569, Asaia bogorensis LMG 21650, Asaia bogorensis MTCC 4041, Asaia bogorensis NBRC 16594
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