STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioA7,8-diaminopelargonic acid synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Product derived from manual annotation; Gene name derived from manual annotation; EC number derived from UniProtKB/Swiss-Prot:P22805; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)    
Predicted Functional Partners:
bioF
8-amino-7-oxononanoate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Product derived from manual annotation; Gene name derived from manual annotation; EC number derived from UniProtKB/Swiss-Prot:Q2W3L2.
 
 
 0.999
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
 0.999
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.995
bioC
malonyl-CoA methyltransferase; Product derived from manual annotation; Gene name derived from manual annotation; EC number derived from UniProtKB/Swiss-Prot:C6V598.
  
  
 0.905
CAHE_0561
Putative uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.777
dapF
Diaminopimelate epimerase; Belongs to the diaminopimelate epimerase family.
      
 0.663
birA
Bifunctional protein BirA; Homologs of previously reported genes of unknown function.
     
 0.523
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.519
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.491
Your Current Organism:
Cardinium endosymbiont cEper1
NCBI taxonomy Id: 1231626
Other names: C. endosymbiont cEper1 of Encarsia pergandiella, Cardinium endosymbiont cEper1 of Encarsia pergandiella, Cardinium hertigii cEper1
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