STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
relAGTP pyrophosphokinase; No homology to any previously reported sequences. (372 aa)    
Predicted Functional Partners:
CAHE_0546
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase.
 
  
  0.997
CAHE_0504
Ppx/GppA phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
  0.905
CAHE_0587
Protein of unknown function; No homology to any previously reported sequences.
  
  
 
0.902
ndk
Nucleoside diphosphate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NDK family.
    
  0.900
Rrm2
Ribonucleoside-diphosphate reductase subunit M2.
     
  0.900
RNR1
Ribonucleoside-diphosphate reductase large subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
  0.900
CAHE_0617
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.775
CAHE_0228
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.774
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
  
 
   0.700
rplO
50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.655
Your Current Organism:
Cardinium endosymbiont cEper1
NCBI taxonomy Id: 1231626
Other names: C. endosymbiont cEper1 of Encarsia pergandiella, Cardinium endosymbiont cEper1 of Encarsia pergandiella, Cardinium hertigii cEper1
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