STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YCZ7Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
A0A1Y2AAM1
50S ribosomal protein L30e-like protein.
   
 0.987
A0A1Y1ZI35
Pseudouridine synthase.
   
 0.965
A0A1Y1YN12
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.918
A0A1Y2A8D8
Ribosomal_L7Ae domain-containing protein.
   
 0.891
A0A1Y1ZZI1
WD40-repeat-containing domain protein.
    
 0.866
A0A1Y1YD01
tRNA pseudouridine synthase B.
   
 0.860
A0A1Y1ZYQ7
Pseudouridine synthase.
   
 0.860
A0A1Y1ZVN6
Uncharacterized protein.
   
 0.849
A0A1Y2A0J4
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.849
A0A1Y2A1W8
Uncharacterized protein.
   
 0.849
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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