A0A1Y1YIM2 protein (Clohesyomyces aquaticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1YIM2

Class I glutamine amidotransferase-like protein. (265 aa)

Predicted Functional Partners:

A0A1Y1ZU96

0.827

A0A1Y1YC31

0.739

A0A1Y1YC36

0.739

A0A1Y1Z1L2

0.739

A0A1Y1ZGS9

0.739

A0A1Y1ZQ80

0.663

A0A1Y1ZFC7

0.632

A0A1Y1ZG32

0.623

A0A1Y1ZYD9

0.590

A0A1Y1YJI7

0.578

Your Current Organism:

Clohesyomyces aquaticus

NCBI taxonomy Id: 1231657
Other names: C. aquaticus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1YC31	A0A1Y1YIM2	Uncharacterized protein.	Class I glutamine amidotransferase-like protein.	0.739
A0A1Y1YC31	A0A1Y1YJI7	Uncharacterized protein.	Kinase-like domain-containing protein.	0.637
A0A1Y1YC36	A0A1Y1YIM2	Uncharacterized protein.	Class I glutamine amidotransferase-like protein.	0.739
A0A1Y1YC36	A0A1Y1YJI7	Uncharacterized protein.	Kinase-like domain-containing protein.	0.637
A0A1Y1YIM2	A0A1Y1YC31	Class I glutamine amidotransferase-like protein.	Uncharacterized protein.	0.739
A0A1Y1YIM2	A0A1Y1YC36	Class I glutamine amidotransferase-like protein.	Uncharacterized protein.	0.739
A0A1Y1YIM2	A0A1Y1YJI7	Class I glutamine amidotransferase-like protein.	Kinase-like domain-containing protein.	0.578
A0A1Y1YIM2	A0A1Y1Z1L2	Class I glutamine amidotransferase-like protein.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.739
A0A1Y1YIM2	A0A1Y1ZFC7	Class I glutamine amidotransferase-like protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.632
A0A1Y1YIM2	A0A1Y1ZG32	Class I glutamine amidotransferase-like protein.	SMP-30/Gluconolaconase/LRE-like region-domain-containing protein.	0.623
A0A1Y1YIM2	A0A1Y1ZGS9	Class I glutamine amidotransferase-like protein.	Superoxide dismutase.	0.739
A0A1Y1YIM2	A0A1Y1ZQ80	Class I glutamine amidotransferase-like protein.	Protein kinase domain-containing protein.	0.663
A0A1Y1YIM2	A0A1Y1ZU96	Class I glutamine amidotransferase-like protein.	Tryptophan synthase.	0.827
A0A1Y1YIM2	A0A1Y1ZYD9	Class I glutamine amidotransferase-like protein.	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase.	0.590
A0A1Y1YJI7	A0A1Y1YC31	Kinase-like domain-containing protein.	Uncharacterized protein.	0.637
A0A1Y1YJI7	A0A1Y1YC36	Kinase-like domain-containing protein.	Uncharacterized protein.	0.637
A0A1Y1YJI7	A0A1Y1YIM2	Kinase-like domain-containing protein.	Class I glutamine amidotransferase-like protein.	0.578
A0A1Y1YJI7	A0A1Y1Z1L2	Kinase-like domain-containing protein.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.637
A0A1Y1YJI7	A0A1Y1ZG32	Kinase-like domain-containing protein.	SMP-30/Gluconolaconase/LRE-like region-domain-containing protein.	0.698
A0A1Y1YJI7	A0A1Y1ZGS9	Kinase-like domain-containing protein.	Superoxide dismutase.	0.637