STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YS16Uncharacterized protein. (70 aa)    
Predicted Functional Partners:
A0A1Y1ZRH0
Iron-sulfur clusters transporter atm1, mitochondrial.
    
 0.690
A0A1Y1YQX2
Ubiquitin carboxyl-terminal hydrolase.
    
  0.501
A0A1Y2ABL3
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
    
 0.479
A0A1Y2A715
Acetyl-CoA carboxylase.
   
 0.452
A0A1Y1ZPG4
Proteasome subunit beta.
   
 0.451
A0A1Y1ZXL1
Calreticulin family-domain-containing protein.
    
  0.440
A0A1Y2A4S2
Heat shock protein 70 family; Belongs to the heat shock protein 70 family.
    
  0.438
A0A1Y2A514
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.436
A0A1Y1ZTV9
Uncharacterized protein.
    
  0.435
A0A1Y2A9U3
Ras guanine nucleotide exchange factor domain-containing protein.
    
  0.420
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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