STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YWP6Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)    
Predicted Functional Partners:
A0A1Y1ZSP8
Pre-mRNA branch site protein p14.
   
 0.998
A0A1Y1ZY15
PHF5-like protein.
   
 0.998
A0A1Y1Y3X7
Uncharacterized protein.
   
 0.997
A0A1Y1YVC2
Armadillo-type protein.
    
 0.997
A0A1Y1ZA77
PSP domain-containing protein.
    
 0.997
A0A1Y2A228
CPSF A subunit region-domain-containing protein.
   
 0.997
A0A1Y1ZZ60
Uncharacterized protein.
    
 0.995
A0A1Y1ZIC7
Small nuclear ribonucleoprotein Sm D2.
   
 0.994
A0A1Y2A9C8
Matrin-type domain-containing protein.
   
 0.993
A0A1Y1YVS1
Small nuclear ribonucleo protein U2, A.
   
 0.992
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.