STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YZV0RBR-type E3 ubiquitin transferase. (398 aa)    
Predicted Functional Partners:
A0A1Y2AB69
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.779
A0A1Y1YWQ5
RBR-type E3 ubiquitin transferase.
  
 
 
0.594
A0A1Y2AB35
RBR-type E3 ubiquitin transferase.
  
 
 
0.582
A0A1Y1ZSB4
RBR-type E3 ubiquitin transferase.
  
 
 
0.580
A0A1Y1ZHM7
Uncharacterized protein.
    
  0.573
A0A1Y1ZHV0
Uncharacterized protein.
    
  0.573
A0A1Y1ZIL9
Ubiquitin-like protein.
    
  0.573
A0A1Y1ZIF3
Uncharacterized protein.
   
  0.570
A0A1Y1ZNJ6
Ubiquitin-like domain-containing protein.
   
  0.570
A0A1Y1ZRB3
Polyubiquitin.
   
  0.570
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.