STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZA44Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
A0A1Y1Z971
HTH La-type RNA-binding domain-containing protein.
 
      0.900
A0A1Y1ZS14
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.674
A0A1Y1ZTG5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.646
A0A1Y1ZI35
Pseudouridine synthase.
   
 
 0.635
A0A1Y1YH86
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.573
A0A1Y1Z8C6
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.551
A0A1Y1YWN2
Cryptococcal mannosyltransferase 1-domain-containing protein.
   
 
 0.524
A0A1Y1YY15
MIF4G domain-containing protein.
   
 
 0.524
A0A1Y1ZLK1
Cryptococcal mannosyltransferase 1-domain-containing protein.
   
 
 0.524
A0A1Y2A221
Cryptococcal mannosyltransferase 1-domain-containing protein.
   
 
 0.524
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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