STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZC07Sec13 protein-like protein; Belongs to the WD repeat SEC13 family. (297 aa)    
Predicted Functional Partners:
A0A1Y1Y2W5
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
0.999
A0A1Y1Z0Z4
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
 0.999
A0A1Y2A726
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A1Y2A8E8
WD_REPEATS_REGION domain-containing protein.
    
 0.999
A0A1Y1ZEH6
WD_REPEATS_REGION domain-containing protein.
    
 0.997
A0A1Y1ZRV0
Zinc_ribbon_16 domain-containing protein.
    
 0.997
A0A1Y2A8J5
WD_REPEATS_REGION domain-containing protein.
    
 0.997
A0A1Y1YTJ9
COPII component protein.
   
 0.994
A0A1Y1ZKY7
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.994
A0A1Y2A603
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.994
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.