STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZE83Uncharacterized protein. (1051 aa)    
Predicted Functional Partners:
A0A1Y2A793
XPC-binding domain-domain-containing protein.
   
 0.979
A0A1Y1ZRZ7
RNA polymerase II transcription factor-like protein.
    
 0.967
A0A1Y1Y670
TFIIH basal transcription factor complex helicase-like protein XPB subunit.
   
 0.935
A0A1Y1ZWS9
Uncharacterized protein.
    
 0.930
A0A1Y1YZ00
EF-hand superfamily Ca2+-modulated protein.
    
 0.929
A0A1Y2A0C6
Helicase ATP-binding domain-containing protein.
    
 0.902
A0A1Y1Y3Q5
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.877
A0A1Y1ZK60
C2H2-type domain-containing protein.
    
 0.869
A0A1Y1ZIR8
XPA protein C-terminus-domain-containing protein.
    
 0.865
A0A1Y1Z953
TFIIH subunit Tfb4/p34.
    
 0.844
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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