A0A1Y1ZFA9 protein (Clohesyomyces aquaticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1ZFA9

Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (282 aa)

Predicted Functional Partners:

A0A1Y1Y3B7

0.894

A0A1Y1ZWX6

0.811

A0A1Y1Y5N8

0.790

A0A1Y1ZY28

0.785

A0A1Y1ZGE2

0.691

A0A1Y1YHI8

0.582

A0A1Y1Y5M7

0.547

A0A1Y1YCI4

0.533

A0A1Y2A0F3

0.486

A0A1Y2A2Z7

0.469

Your Current Organism:

Clohesyomyces aquaticus

NCBI taxonomy Id: 1231657
Other names: C. aquaticus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1Y3B7	A0A1Y1Y5N8	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	0.506
A0A1Y1Y3B7	A0A1Y1YHI8	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.900
A0A1Y1Y3B7	A0A1Y1ZFA9	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.894
A0A1Y1Y3B7	A0A1Y1ZGE2	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Cytochrome c1, mitochondrial.	0.928
A0A1Y1Y3B7	A0A1Y1ZWX6	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.893
A0A1Y1Y3B7	A0A1Y1ZY28	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.889
A0A1Y1Y3B7	A0A1Y2A2Z7	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.693
A0A1Y1Y5M7	A0A1Y1Y5N8	Uncharacterized protein.	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	0.915
A0A1Y1Y5M7	A0A1Y1ZFA9	Uncharacterized protein.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.547
A0A1Y1Y5M7	A0A1Y1ZGE2	Uncharacterized protein.	Cytochrome c1, mitochondrial.	0.670
A0A1Y1Y5M7	A0A1Y2A0F3	Uncharacterized protein.	NADH-ubiquinone oxidoreductase-like protein 40 kDa subunit.	0.972
A0A1Y1Y5M7	A0A1Y2A2Z7	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.909
A0A1Y1Y5N8	A0A1Y1Y3B7	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	0.506
A0A1Y1Y5N8	A0A1Y1Y5M7	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Uncharacterized protein.	0.915
A0A1Y1Y5N8	A0A1Y1YHI8	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.787
A0A1Y1Y5N8	A0A1Y1ZFA9	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.790
A0A1Y1Y5N8	A0A1Y1ZGE2	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Cytochrome c1, mitochondrial.	0.997
A0A1Y1Y5N8	A0A1Y1ZWX6	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.	0.545
A0A1Y1Y5N8	A0A1Y2A0F3	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	NADH-ubiquinone oxidoreductase-like protein 40 kDa subunit.	0.999
A0A1Y1Y5N8	A0A1Y2A2Z7	Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.997