STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZGB3Uncharacterized protein. (481 aa)    
Predicted Functional Partners:
A0A1Y2A897
Uncharacterized protein.
    
 0.978
A0A1Y1ZHK8
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
 
      0.896
A0A1Y1ZK19
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.887
A0A1Y2A5I1
ATP synthase regulation protein NCA2-domain-containing protein.
    
 0.839
A0A1Y2A677
Ras-related protein rab-like protein-11B.
    
 0.822
A0A1Y1ZYK3
Small GTPase superfamily.
    
 0.816
A0A1Y1Y8F3
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.815
A0A1Y1ZW29
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.803
A0A1Y1ZZK8
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.792
A0A1Y2A886
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.776
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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