STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZGF1Uncharacterized protein. (566 aa)    
Predicted Functional Partners:
A0A1Y1XXL6
Uncharacterized protein.
    
 0.626
A0A1Y1Z9E1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.545
A0A1Y1ZEJ3
Hist_deacetyl domain-containing protein.
    
 0.545
A0A1Y1ZQ64
SRF-type transcription factor (DNA-binding and dimerization domain)-domain-containing protein.
   
 
 0.543
A0A1Y1Y3Q9
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.506
A0A1Y1YV85
Putative HOS3-like histone deacetylase.
    
  0.447
A0A1Y2A6Q5
Uncharacterized protein.
    
  0.447
A0A1Y1Y6E8
PhoD-like phosphatase-domain-containing protein.
    
 0.413
A0A1Y1YVH0
Cortical protein marker for cell polarity-domain-containing protein.
    
 0.413
A0A1Y1Z7V7
Phosphodiesterase/alkaline phosphatase D.
    
 0.413
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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