STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZH77ATP dependent RNA helicase-like protein. (584 aa)    
Predicted Functional Partners:
A0A1Y1YL06
WD40-repeat-containing domain protein.
   
 0.976
A0A1Y1YK85
Armadillo-type protein.
   
 0.972
A0A1Y1ZPZ9
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.972
A0A1Y1Z8D6
SYF2 splicing factor-domain-containing protein.
    
 0.970
A0A1Y1ZJW2
Pre-mRNA-splicing factor CWC21.
    
 0.956
A0A1Y1YJJ2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.949
A0A1Y1ZRI0
Utp14 protein-domain-containing protein.
   
 0.949
A0A1Y1ZIC7
Small nuclear ribonucleoprotein Sm D2.
   
 0.948
A0A1Y2AA10
Small nuclear ribonucleoprotein G.
    
 0.947
A0A1Y1ZFR5
Sas10 C-terminal domain-domain-containing protein.
   
 0.944
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.