STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZJ50Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
A0A1Y1ZNQ8
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.831
A0A1Y2A908
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.800
A0A1Y1ZQS5
U3 snoRNP protein Utp20.
   
  0.535
A0A1Y1Y615
Nop domain-containing protein.
    
  0.520
A0A1Y1ZP97
Dip2/Utp12 family-domain-containing protein.
    
  0.518
A0A1Y2A8E7
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.517
A0A1Y2AB28
WD_REPEATS_REGION domain-containing protein.
    
  0.515
A0A1Y1YPB0
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.514
A0A1Y1Z8C6
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.514
A0A1Y1ZAF6
WD40-repeat-containing domain protein.
    
  0.514
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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