STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZJ72Saccharopine dehydrogenase. (462 aa)    
Predicted Functional Partners:
A0A1Y1ZS93
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
   
 0.965
A0A1Y1ZF41
Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.
  
 
 0.946
A0A1Y1Z3G8
Iso_dh domain-containing protein.
   
  
 0.881
A0A1Y1Z7I2
L-aminoadipate-semialdehyde dehydrogenase-like protein large subunit.
  
 
 0.880
A0A1Y1ZG04
Linear gramicidin synthetase subunit C.
  
 
 0.853
A0A1Y1ZGE8
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.848
A0A1Y1Y661
S-adenosylmethionine decarboxylase.
     
 0.792
A0A1Y1Z425
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
  
 0.698
A0A1Y1ZS30
Alkyl transferase; Belongs to the UPP synthase family.
 
      0.667
A0A1Y1ZMP7
Semialdhyde_dh domain-containing protein.
   
 
 0.642
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.