STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZK82Putative RNA methyltransferase-domain-containing protein. (559 aa)    
Predicted Functional Partners:
A0A1Y1YG90
Anticodon-binding protein.
   
  
 0.891
A0A1Y1Z8B3
WD40-repeat-containing domain protein.
   
    0.809
A0A1Y1ZV32
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
   0.809
A0A1Y1ZWF4
CBF/Mak21 family-domain-containing protein.
   
    0.773
A0A1Y1YJI6
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.768
A0A1Y2A5J4
Utp21 specific WD40 associated putative domain-domain-containing protein.
   
    0.766
A0A1Y1YN02
Bystin-domain-containing protein.
   
    0.765
A0A1Y2A2M6
NUC153 domain-containing protein.
   
   0.696
A0A1Y1ZGN9
Brix domain-domain-containing protein.
   
   0.685
A0A1Y1YUF1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
   0.678
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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