STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZM29Major facilitator superfamily domain-containing protein. (478 aa)    
Predicted Functional Partners:
A0A1Y1YDJ1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
    
  0.617
A0A1Y2AAW8
Polygalacturonase.
    
  0.579
A0A1Y2ABS2
WD40-repeat-containing domain protein.
   
 0.573
A0A1Y2A856
Rix1 complex component.
    
 0.552
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.535
A0A1Y1ZBN1
Pectin lyase fold/virulence factor.
    
 0.531
A0A1Y1ZJT2
Glycoside hydrolase family 28 protein; Belongs to the glycosyl hydrolase 28 family.
    
 0.531
A0A1Y1Z6H0
60S ribosomal protein-like protein L2/L8.
    
  0.491
A0A1Y1YKU3
AAA domain-containing protein.
    
  0.483
A0A1Y1ZTZ9
Nucleolar GTP-binding protein 2.
   
  0.467
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.