STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZMS0Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
A0A1Y2A972
Elongator complex protein 4.
   
 0.975
A0A1Y1YN69
RNA polymeras-like protein II Elongator subunit.
   
 0.974
A0A1Y1ZLJ2
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 0.974
A0A1Y2A507
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
    
 
 0.961
A0A1Y1ZJ13
Elongator subunit Iki1-domain-containing protein.
   
 0.934
A0A1Y1YRK9
Uncharacterized protein.
   
 
 0.902
A0A1Y1ZNF9
Uncharacterized protein.
   
 
 0.902
A0A1Y1ZM98
Uncharacterized protein.
   
 
 0.866
A0A1Y2A8K2
WH1 domain-containing protein.
   
 0.764
A0A1Y2AA22
Uncharacterized protein.
   
 0.764
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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