STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZP76DUF1767 domain-containing protein. (232 aa)    
Predicted Functional Partners:
A0A1Y2A2S4
3'-5' exonuclease domain-containing protein.
    
 0.997
A0A1Y1ZPZ3
ERCC4 domain-containing protein.
    
 0.989
A0A1Y1ZQJ1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.984
A0A1Y1YBJ9
Uncharacterized protein.
    
 0.980
A0A1Y1ZNK1
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.969
A0A1Y1YQC3
Uncharacterized protein.
    
 0.968
A0A1Y1Z013
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.931
A0A1Y1ZTV9
Uncharacterized protein.
    
 0.922
A0A1Y1Y0U1
Uncharacterized protein.
    
 0.917
A0A1Y1YTG7
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.917
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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