STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZQP4Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
A0A1Y2ABS2
WD40-repeat-containing domain protein.
    
  0.558
A0A1Y1YZB7
POT1PC domain-containing protein.
    
  0.524
A0A1Y1ZP44
WD40-repeat-containing domain protein.
    
  0.522
A0A1Y1YTP4
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.517
A0A1Y1Z036
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.516
A0A1Y1ZV52
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
  0.515
A0A1Y1Z1X3
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
  0.510
A0A1Y1ZJN2
SCA7, zinc-binding domain-domain-containing protein.
    
  0.510
A0A1Y1Z9E9
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.501
A0A1Y1ZG12
Raptor N-terminal caspase like domain-domain-containing protein.
    
 0.488
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.