STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZRI5Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
A0A1Y1ZKT6
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
A0A1Y1YVP3
Uncharacterized protein.
   
 
 0.995
A0A1Y1YZH3
50S ribosomal protein-like protein L13.
   
 
 0.994
A0A1Y2ABH8
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.994
A0A1Y1ZKX6
Mitochondrial 54S ribosomal protein YmL9.
   
  0.992
A0A1Y1ZSX0
Ribosomal protein L11, N-terminal domain-domain-containing protein; Belongs to the universal ribosomal protein uL11 family.
   
 0.992
A0A1Y1ZI66
Uncharacterized protein.
   
 
 0.990
A0A1Y2A3Z0
Ribosomal protein S16 domain-containing protein.
   
   0.990
A0A1Y2A9N7
Translation protein SH3-like domain-containing protein.
   
 
 0.990
A0A1Y1ZYJ3
Thioredoxin-like protein.
   
 
 0.989
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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