STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZS68Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (465 aa)    
Predicted Functional Partners:
A0A1Y1Y0Q2
Uncharacterized protein.
    
 0.999
A0A1Y1Y394
Uncharacterized protein.
    
 0.902
A0A1Y2A9W1
Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family.
   
 0.895
A0A1Y2A193
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.884
A0A1Y1ZS30
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.876
A0A1Y1YTH3
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
   
 0.873
A0A1Y2A3N9
Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family.
   
 0.873
A0A1Y1Z5F5
Phosphatidylinositol N-acetylglucosaminyltransferas-like protein subunit C.
     
 0.844
A0A1Y1Y9W5
Uncharacterized protein.
   
 0.840
A0A1Y2AAU8
Di-trans,poly-cis-decaprenylcistransferas-like protein.
     
 0.835
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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