STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZSF1Trimeric LpxA-like protein. (216 aa)    
Predicted Functional Partners:
A0A1Y1Z791
Dynactin-like protein Arp1 p62 subunit RO2.
   
 0.999
A0A1Y1ZRK1
Trimeric LpxA-like protein.
   
 0.999
A0A1Y1Y613
Actin-domain-containing protein; Belongs to the actin family.
    
 0.990
A0A1Y1ZMV7
Dynein associated protein-domain-containing protein.
    
 0.988
A0A1Y2ABI3
Dynamitin-domain-containing protein.
    
 0.988
A0A1Y2AAF3
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.968
A0A1Y1ZJT1
Actin family.
    
 0.954
A0A1Y1ZN99
Actin family; Belongs to the actin family.
    
 0.954
A0A1Y1Z487
WD40-repeat-containing domain protein.
  
 
 0.875
A0A1Y1Z8C4
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.861
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.