STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1ZSL3RRM domain-containing protein. (138 aa)    
Predicted Functional Partners:
A0A1Y2A938
SART-1 protein.
   
 0.927
A0A1Y1ZXQ3
t-SNARE coiled-coil homology domain-containing protein.
    
 0.923
A0A1Y1Z926
Small nuclear ribonucleo protein-like protein F.
    
 0.883
A0A1Y1YM11
G protein-coupled glucose receptor regulating Gpa2-domain-containing protein.
    
  0.861
A0A1Y1YJJ2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.843
A0A1Y1YDM3
Uncharacterized protein.
    
  0.841
A0A1Y1ZIC7
Small nuclear ribonucleoprotein Sm D2.
   
  0.841
A0A1Y1ZJ01
SNRNP27 domain-containing protein.
    
  0.837
A0A1Y1ZR48
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.837
A0A1Y1ZAE6
Pre-mRNA processing factor 3-domain-containing protein.
   
  0.834
Your Current Organism:
Clohesyomyces aquaticus
NCBI taxonomy Id: 1231657
Other names: C. aquaticus
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